Keng Wah Choo, Wai Mun Tham

Tandem mass spectrometry data quality assessment by self-convolution .
BMC Bioinformatics 8, 352, 2007.

K.W. Choo.

Measuring peptide mass spectrum correlation using the quantum Grover algorithm.
Physical Review E Vol 75 No 3: 031919, 2007.
Virtual Journal of Biological Physics Research, Vol 13, Issue 7, 2007

K.W. Choo, Waiming Kong.

Identification of Differentially Expressed Genes in Multiple Microarray Experiments Using Discrete Fourier Transform.
Frontiers in Bioscience 12, pg. 1845-1851, 2007.

Waiming Kong, and K.W. Choo.

Predicting Single Nucleotide Polymorphisms (SNP) From DNA Sequence By Support Vector Machine.
Frontiers in Bioscience 12, pg. 1610-1614, 2007.

Adrian EH Png, Keng Wah Choo, Cheryl IP Lee, Siew Hong Leong, Oi Lian Kon.

Primer Design for Whole Genome Amplification using Genetic Algorithms.
In Silico Biology 6, 0047, 2006.

Adrian EH Png, Tsu Soo Tan, Keng Wah Choo.

Large-Scale Simulation And Prediction of HLA Epitope Complex Structures.
GRID COMPUTING IN LIFE SCIENCES: Proceedings of the 2nd International Life Science Grid Workshop. pg 189-196, 2006.

Cheryl I. P. Lee, Siew Hong Leong, Adrian E. H. Png, Keng Wah Choo, Christopher Syn, Dennis T. H. Lim, Hai Yang Law, and Oi Lian Kon.

An Isothermal Primer Extension Method for Whole Genome Amplification of Fresh and Degraded DNA: Applications in Comparative Genomic Hybridization, Genotyping and Mutation Screening.
Nature Protocols 2006, 1(5): 2185-94.

Cheryl I. P. Lee, Siew Hong Leong, Adrian E. H. Png, Keng Wah Choo, Christopher Syn, Dennis T. H. Lim, Hai Yang Law, and Oi Lian Kon.

An Isothermal Method for Whole Genome Amplification of Fresh and Degraded DNA for Comparative Genomic Hybridisation and Genotyping.
DNA Research 13, 77-88(2006), doi:10.1093/dnares/dsi029, March 27, 2006.

K.W. Choo.

Quantum Computing, Grover’s Search Algorithm And Its Applications In Bioinformatics.
COSMOS, Vol. 2(1), pg. 71-80, 2006.

Waiming Kong, Tsu Soo Tan, Lawrence Tham, Keng Wah Choo.

Improved Prediction of Allergenicity By Combination of Multiple Sequence Motifs.
In Silico Biology 7, 0006 (2006).

Wong KY, Chuan YC, Aggarwal A, Tham L, Kong WM, Tan P.

Identifying patterns of DNA for tumor diagnosis using capillary electrophoresis-amplified fragment length polymorphism (CE-AFLP) screening.
Journal of Bioinformatics and Computational Biology. Vol. 2, No. 3, pg. 569-587, 2004.

Conferences & Poster Presentations:

Angela Jean, Waiming Kong, Tsu Soo Tan, Lee Sing Cheong and Soo Yong Tan.

Automated grading of Her2/neu Status in Breast Carcinomas.
Singapore Symposium on Computational Biology 8th Sep 2009.

Waiming Kong, Tsu Soo Tan, Angela Jean, Desmond Lim, Lee Sing Cheong, Joyce Wong and Ma Su Thi Han.

Automatic Identification of the Larvae of Aedes albopictus and Aedes aegypti to Control Dengue Outbreaks.
Singapore Symposium on Computational Biology 8th Sep 2009.

Angela Jean, W. M. Kong, Tsu Soo Tan, Soo Yong Tan.

Automated Grading of HER-2/neu in Breast Carcinoma.
High Content Cellular Screening Workshop 12th Nov - 13th Nov 2008.

Angela Jean.

Image Informatics for High Content Screening.
GridAsia 15th Sep - 19th Sep 2008.

W. M. Kong.

Bioinformatics Support for the Singapore Biomedical Community.
Singapore Symposium on Computational Biology 1st Aug 2008.

Lawrence W. M. Tham, Alvin Eng.

Developing A Knowledge Discovery Platform for Collaborative Research in Gastric Cancer.
Bridging Pharma & IT: Leveraging Information Technology to Improve Productivity 30 Sep - 2nd Oct 2007.

Adrian E.H. Png, Lawrence W. M. Tham, K.W. Choo, W.M. Kong, A.K.H. Eng, O.L. Kon and W.K. Wong.

A Data Warehouse For Analysing Clinical and Experimental Facets of Gastric Cancer.

BioITWorld Conference & Expo 30 Apr - 2nd May 2007.
Best Poster Award

Adrian E.H. Png, K.W. Choo, W.M. Kong, C.I.P. Lee, S.H. Leong and O.L. Kon.

A Machine Learning Approach to Design Better Primers for Unbiased Whole Genome Amplification.
BioITWorld Conference & Expo 30 Apr - 2nd May 2007.

A E.H. Png, L. W. M. Tham, K.W. Choo, A.K.H. Eng, O.L. Kon and W.K. Wong.

Gastric Cancer Knowledge Management System.
The International Conference on Mechanics in Medicine and Biology (ICMMB) 6-8th Dec 2006.

AKH Eng, SS Lee, SY Tan, SH Lai, TKH Lim, KW Choo, WH Chan, HS Ong, WK Wong, DTH Lim, OL Kon.

A Study Of Genomic Aberrations In Gastric Adenocarcinoma Using Microarray Comparative Genomic Hybridisation.
The Sixth Cold Spring Harbor Laboratory/Wellcome Trust conference on Genome Informatics. 13-17th Sep 2006.

K.W. Choo.

Identification of Core and Distinct Pathway Networks from Expression Profiles.
The International Conference on Mechanics in Medicine and Biology (ICMMB) 6-8th Dec 2006.

K.W. Choo, W. M. Kong.

Simplified Discrete Fourier Transform (s-DFT) for Identification of Differentially Expressed Datasets.
The International Conference on Mechanics in Medicine and Biology (ICMMB) 6-8th Dec 2006.

Lawrence Tham, Keng Wah Choo.

Quality Assessment Of Tandem Mass Spectra Using DC-shifted Self-convolution Method.
Joint Third AOHUPO and Fourth Structural Biology and Functional Genomics Conference. 4-7th Dec 2006.

Waiming Kong, Tsu Soo Tan, Keng Wah Choo.

Prediction of Allergenicity of Proteins Using Double Motifs.
Joint Third AOHUPO and Fourth Structural Biology and Functional Genomics Conference. 4-7th Dec 2006.

Waiming Kong, Lawrence Tham, Kee Yew Wong, Patrick Tan.

Support Vector Machine Approach for Cancer Detection using Amplified Fragment Length Polymorphism (AFLP) Screening Method.
The Second Asia-Pacific Bioinformatics Conference. 18- 22nd Jan 2004.

Haifeng Liu, Loo-Nin Teow, Eric Yap, Sock-Hoon Ng, Hui Min Wu, Seo-Hwee Gan, Adrian Eng, Loo See Teo, Keng Wah Choo.

dbSTR: Database for Short Tandem Repeats.
International Conference on Intelligent Systems for Molecular Biology (ISMB) Conference. 29 Jun - 3 Jul 2003